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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Graimondii_physical
(Reference Set)
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Correspondences
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Maps Gr_Chr10
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr10
Map Start: 0 bp
Map Stop: 62,133,863 bp
Features by Type:
245 Marker Cotton
245 Total

Map Features

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Items 1 to 25 of 245.       of 10 | Next
Cotton - Graimondii_physical - Gr_Chr10
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
A1152 Marker Cotton 25,224,837 - 25,225,949 Cotton - PK - c6 A1152 Marker 58 (cM) Automated name-based View Maps
Cotton - GVc - 6 A1152 Marker 63.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 A1152 Marker 143.6 (cM) Automated name-based View Maps
A1402 Marker Cotton 10,625,918 - 10,626,174 Cotton - PK - c6 A1402 Marker 34.3 (cM) Automated name-based View Maps
A1550 Marker Cotton 5,910,569 - 5,910,825 Cotton - PK - c25 A1550 Marker 77.5 (cM) Automated name-based View Maps
Cotton - PK - c6 A1550 Marker 23.6 (cM) Automated name-based View Maps
A1640 Marker Cotton 62,132,915 - 62,133,863 Cotton - PK - c6 A1640 Marker 117.5 (cM) Automated name-based View Maps
A1742 Marker Cotton 29,847,469 - 29,848,796 Cotton - PK - c6 A1742 Marker 58 (cM) Automated name-based View Maps
Cotton - PK - c25 A1742 Marker 96.5 (cM) Automated name-based View Maps
A1763 Marker Cotton 54,082,819 - 54,083,584 Cotton - GVc - 6 A1763 Marker 67.2 (cM) Automated name-based View Maps
Cotton - PK - c4 A1763 Marker 134.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 A1763 Marker 30.29 (cM) Automated name-based View Maps
BNL0150 Marker Cotton 53,313,609 - 53,313,864 Cotton - E3 - 25 BNL0150 Marker 94.2 (cM) Automated name-based View Maps
BNL0827 Marker Cotton 995,126 - 995,449 Cotton - E3 - 25 BNL0827 Marker 21.8 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL0827 Marker 116.26 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL0827 Marker 122.63 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL0827 Marker 115.7 (cM) Automated name-based View Maps
BNL1064 Marker Cotton 26,566,573 - 26,566,814 Cotton - CH - 6 BNL1064 Marker 90.4 (cM) Automated name-based View Maps
Cotton - E3 - 6 BNL1064 Marker 93.4 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL1064 Marker 63 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL1064 Marker 64.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL1064 Marker 25.34 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL1064 Marker 148 (cM) Automated name-based View Maps
Cotton - PK - c6 BNL1064 Marker 58 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1064 Marker 56.46 (cM) Automated name-based View Maps
BNL1153 Marker Cotton 19,375,282 - 19,375,657 Cotton - PK - c25 BNL1153 Marker 88.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1153 Marker 90 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1153 Marker 69.3 (cM) Automated name-based View Maps
Cotton - PK - c6 BNL1153 Marker 49.3 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1153 Marker 50.7 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1153 Marker 79.7 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1153 Marker 74 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1153 Marker 80.1 (cM) Automated name-based View Maps
BNL1417 Marker Cotton 49,863,051 - 49,863,290 Cotton - Guazuncho2xVH8-RIL - c25 BNL1417 Marker 44.8 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1417 Marker 46.74 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1417 Marker 87.7 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1417 Marker 93 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1417 Marker 114.9 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1417 Marker 91.1 (cM) Automated name-based View Maps
BNL1440 Marker Cotton 17,749,853 - 17,750,142 Cotton - Guazuncho2xVH8-BC2 - c25 BNL1440 Marker 63.3 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1440 Marker 28.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL1440 Marker 108.1 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1440 Marker 69.7 (cM) Automated name-based View Maps
Cotton - PK - c25 BNL1440 Marker 84.6 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL1440 Marker 48.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1440 Marker 84.9 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1440 Marker 65.31 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1440 Marker 68.81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL1440a Marker 18.52 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL1440b Marker 34.18 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL1440 Marker 69.3 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1440 Marker 95.2 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL1440 Marker 66.3 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1440 Marker 79 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL1440 Marker 43.9 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL1440 Marker 89.4 (cM) Automated name-based View Maps
BNL2884 Marker Cotton 57,271,338 - 57,271,690 Cotton - TH - 6 BNL2884 Marker 41.6 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL2884 Marker 117.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL2884 Marker 198.6 (cM) Automated name-based View Maps
Cotton - E3 - 6 BNL2884 Marker 113.2 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL2884 Marker 78.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL2884 Marker 80.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL2884 Marker 35.92 (cM) Automated name-based View Maps
BNL3103 Marker Cotton 40,569,897 - 40,570,358 Cotton - CH - 25 BNL3103 Marker 99.7 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL3103 Marker 88.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL3103 Marker 107.4 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL3103 Marker 83 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3103 Marker 31.5 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL3103 Marker 52.54 (cM) Automated name-based View Maps
BNL3359 Marker Cotton 813,375 - 814,071 Cotton - Guazuncho2xVH8-BC2 - c25 BNL3359 Marker 1.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL3359 Marker 11.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL3359 Marker 11.1 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL3359 Marker 135 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3359 Marker 129.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL3359a Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL3359b Marker 12.41 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL3359 Marker 8.6 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL3359 Marker 12.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL3359 Marker 0 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL3359 Marker 5.4 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL3359 Marker 125.4 (cM) Automated name-based View Maps
BNL3398 Marker Cotton 39,850,114 - 39,851,025 Cotton - T3 - 3 BNL3398 Marker 58.75 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL3398 Marker 97.1 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL3398 Marker 4.2 (cM) Automated name-based View Maps
BNL3436 Marker Cotton 1,762,841 - 1,763,503 Cotton - TH - 25 BNL3436 Marker 101.5 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL3436 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL3436 Marker 26.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL3436 Marker 4.25 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL3436 Marker 120.69 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL3436 Marker 21.5 (cM) Automated name-based View Maps
BNL3594 Marker Cotton 60,792,621 - 60,793,070 Cotton - T3 - 25 BNL3594 Marker 12.86 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL3594 Marker 12.27 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL3594 Marker 53.5 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL3594 Marker 135.2 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3594 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL3594 Marker 273.2 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL3594 Marker 6.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL3594 Marker 108.7 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL3594 Marker 152.3 (cM) Automated name-based View Maps
BNL3655 Marker Cotton 34,877,588 - 34,878,021 Cotton - E3 - 25 BNL3655 Marker 65.3 (cM) Automated name-based View Maps
BNL3806 Marker Cotton 10,181,798 - 10,182,438 Cotton - Guazuncho2xVH8-BC2 - c25 BNL3806 Marker 48 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL3806 Marker 24.85 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL3806 Marker 68.3 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL3806 Marker 55.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL3806 Marker 62.7 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL3806 Marker 66.7 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL3806 Marker 70.89 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3806 Marker 59.3 (cM) Automated name-based View Maps
BNL3874 Marker Cotton 58,410,543 - 58,410,937 Cotton - T3 - 9 BNL3874 Marker 106.59 (cM) Automated name-based View Maps
BNL3937 Marker Cotton 25,302,993 - 25,303,432 Cotton - T3 - 25 BNL3937 Marker 55.51 (cM) Automated name-based View Maps
BNL4100 Marker Cotton 17,607,458 - 17,607,831 Cotton - E3 - 25 BNL4100 Marker 77 (cM) Automated name-based View Maps
BNL4108 Marker Cotton 31,336,680 - 31,336,923 Cotton - CH - 6 BNL4108 Marker 88.6 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL4108 Marker 56.75 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL4108 Marker 148 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL4108 Marker 61.5 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL4108 Marker 64.1 (cM) Automated name-based View Maps
CIR017 Marker Cotton 1,295,102 - 1,295,307 Cotton - Guazuncho2xVH8-BC1 - c6 CIR017 Marker 42.1 (cM) Automated name-based View Maps
Cotton - T3 - 6 CIR017 Marker 119.86 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 CIR017 Marker 7.13 (cM) Automated name-based View Maps
Cotton - GVc - 6 CIR017 Marker 0 (cM) Automated name-based View Maps
Cotton - CH - 6 CIR017 Marker 13.9 (cM) Automated name-based View Maps